STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL95433.1Type IV pilus assembly protein PilO. (236 aa)    
Predicted Functional Partners:
SEL95453.1
Type IV pilus assembly protein PilN.
 
 
 0.998
SEL95412.1
Type IV pilus assembly protein PilP.
 
 
 0.992
SEL95485.1
Type IV pilus assembly protein PilM.
 
 
 0.986
SEL95394.1
Type IV pilus assembly protein PilQ; Belongs to the bacterial secretin family.
 
 
 0.978
SEM73515.1
Tfp pilus assembly protein PilN.
  
 
 0.895
SEM52929.1
Type IV pilus assembly protein PilW.
 
  
 0.791
SEL95379.1
Protein of unknown function.
       0.757
SEM52973.1
Type IV fimbrial biogenesis protein FimT.
 
  
 0.725
SEL95506.1
Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.
 
     0.715
SEM06392.1
Type IV pilin N-term methylation site GFxxxE.
 
  
 0.692
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.