STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL96578.1Alcohol dehydrogenase. (353 aa)    
Predicted Functional Partners:
SEM41167.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.933
SEM18621.1
NADH-quinone oxidoreductase subunit F.
  
 
 0.852
SEM09826.1
4Fe-4S binding domain-containing protein.
  
 
 0.800
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
  
 
 0.768
SEM15853.1
Aldehyde dehydrogenase (NAD+).
  
 0.762
SEL96045.1
Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.751
SEM66928.1
Uncharacterized zinc-type alcohol dehydrogenase-like protein.
 
 0.723
SEL96153.1
8-amino-7-oxononanoate synthase.
  
 
 0.722
SEM25588.1
Glycine C-acetyltransferase.
  
 
 0.722
SEL96598.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
  
  
 0.719
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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