STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL93339.1Acetyltransferase. (706 aa)    
Predicted Functional Partners:
SEM41167.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.903
SEM54564.1
Acetyltransferase.
  
  
 
0.818
SEM35114.1
Acetyltransferase.
  
  
 
0.803
SEM14285.1
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.783
SEM78322.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
  0.783
SEL93357.1
Hypothetical protein.
       0.778
SEM15853.1
Aldehyde dehydrogenase (NAD+).
    
 0.762
SEL94985.1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
  0.760
SEM78300.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
    
  0.757
SEL93307.1
Hypothetical protein.
       0.556
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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