STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL93753.1Hypothetical protein. (524 aa)    
Predicted Functional Partners:
SEL93702.1
Hypothetical protein.
       0.773
SEL93718.1
Hypothetical protein.
       0.773
SEL93743.1
Hypothetical protein.
       0.773
SEL93779.1
Hypothetical protein.
       0.773
SEL93787.1
Hypothetical protein.
       0.661
SEL93684.1
Hypothetical protein.
       0.598
SEL93630.1
Hypothetical protein.
       0.590
SEL93641.1
Uncharacterized phage protein gp47/JayE.
       0.590
SEL93664.1
Hypothetical protein.
       0.590
SEL93572.1
Hypothetical protein.
       0.515
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.