STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM01335.1Formate dehydrogenase (quinone-dependent) catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (831 aa)    
Predicted Functional Partners:
SEM01306.1
Formate dehydrogenase major subunit.
  
  0.992
SEM01349.1
Formate dehydrogenase (quinone-dependent) iron-sulfur subunit.
 
 0.982
SEM50094.1
Formate dehydrogenase major subunit.
  
  0.981
SEM01362.1
Formate dehydrogenase subunit gamma.
 
 0.965
SEM09826.1
4Fe-4S binding domain-containing protein.
  
 
 0.954
SEM50133.1
Formate dehydrogenase (quinone-dependent) iron-sulfur subunit.
 
 0.935
SEM41167.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.929
SEM50154.1
Formate dehydrogenase subunit gamma.
 
 0.876
SEM65337.1
Tat (twin-arginine translocation) pathway signal sequence.
 
 0.863
SEM24083.1
Formate dehydrogenase iron-sulfur subunit.
 
 0.853
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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