STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM01491.1KilA-N domain-containing protein. (116 aa)    
Predicted Functional Partners:
SEM01509.1
HsdM N-terminal domain-containing protein.
       0.822
SEM01471.1
Type I restriction enzyme, R subunit.
       0.749
SEM41659.1
Uncharacterized conserved protein.
 
     0.524
gpmA
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
       0.473
SEM41688.1
Predicted nuclease of restriction endonuclease-like (RecB) superfamily, DUF1016 family.
 
     0.470
SEM01448.1
Chemotaxis signal transduction protein.
       0.464
SEM48238.1
Hypothetical protein.
  
     0.429
SEM48281.1
Hypothetical protein.
  
     0.406
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.