STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM01623.1Sodium/potassium-transporting ATPase subunit alpha. (881 aa)    
Predicted Functional Partners:
SEM01640.1
Nucleotide-binding universal stress protein, UspA family.
  
    0.794
SEM71141.1
Type I secretion C-terminal target domain (VC_A0849 subclass).
   
 
 0.510
SEM19691.1
Small GTP-binding protein domain-containing protein.
   
 0.507
SEM27850.1
Exosortase D, VPLPA-CTERM-specific.
    
 0.495
SEM01601.1
Ca2+-transporting ATPase.
 
    
0.483
SEM01592.1
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family.
  
    0.482
SEM41517.1
Zn-dependent protease (includes SpoIVFB); Belongs to the peptidase M50B family.
  
 0.469
SEL96598.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
  
 0.467
SEM01558.1
Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
  
   0.437
SEL93428.1
Hypothetical protein.
  
    0.434
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.