STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM02015.1Hypothetical protein. (188 aa)    
Predicted Functional Partners:
SEM25571.1
Protein of unknown function.
  
     0.657
SEM02001.1
Hypothetical protein.
 
   
0.629
SEM71141.1
Type I secretion C-terminal target domain (VC_A0849 subclass).
  
  
 0.528
SEM43434.1
Protein of Unknown function.
  
     0.469
SEM14046.1
Glycine-zipper containing OmpA-like membrane domain-containing protein.
  
     0.451
SEM14255.1
Protein of unknown function.
  
     0.441
SEM14238.1
Protein of unknown function.
  
     0.418
SEM22919.1
Protein of unknown function.
  
     0.417
SEM22931.1
Protein of unknown function.
  
     0.406
SEM13766.1
Hypothetical protein.
  
     0.403
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.