STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM02254.1Serine protease Do; Belongs to the peptidase S1C family. (496 aa)    
Predicted Functional Partners:
SEL98818.1
Serine protease Do; Belongs to the peptidase S1C family.
  
  
 
0.803
SEM01299.1
PAS domain S-box-containing protein.
  
  
 0.746
SEM01949.1
PAS domain S-box-containing protein.
  
  
 0.746
SEM77183.1
PAS domain S-box-containing protein.
  
  
 0.746
SEM02270.1
DNA-3-methyladenine glycosylase III.
       0.685
SEM02289.1
Hypothetical protein.
       0.672
ilvD
Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family.
       0.662
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
 
  0.626
SEM05805.1
ATPase family associated with various cellular activities (AAA).
    
 0.604
SEM18405.1
WD domain-containing protein, G-beta repeat-containing protein.
  
 
  0.603
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.