STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM06392.1Type IV pilin N-term methylation site GFxxxE. (205 aa)    
Predicted Functional Partners:
SEM06416.1
PilX N-terminal.
 
  
 0.956
SEM06359.1
Type IV fimbrial biogenesis protein FimT.
 
  
 0.917
SEM06372.1
N-terminal methylation site-containing protein.
 
  
 0.869
SEM52973.1
Type IV fimbrial biogenesis protein FimT.
 
  
 0.820
SEL95453.1
Type IV pilus assembly protein PilN.
 
   
 0.736
SEL95433.1
Type IV pilus assembly protein PilO.
 
  
 0.692
SEL95485.1
Type IV pilus assembly protein PilM.
 
   
 0.578
SEM53335.1
ATP synthase I chain.
  
     0.535
SEM51921.1
General secretion pathway protein H.
 
  
 0.520
SEM52944.1
Type IV pilus assembly protein PilV.
 
  
 0.498
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.