STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM06732.1Rubrerythrin. (151 aa)    
Predicted Functional Partners:
SEM06751.1
Major Facilitator Superfamily protein.
 
     0.544
SEM55677.1
Protein of unknown function.
  
     0.496
SEM06769.1
Major Facilitator Superfamily protein.
       0.479
SEM06784.1
Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
    0.474
SEL93357.1
Hypothetical protein.
  
     0.472
SEM51605.1
Hypothetical protein.
  
     0.460
SEM06701.1
Hypothetical protein.
       0.444
SEM45928.1
Uncharacterized conserved protein YybS, DUF2232 family.
  
     0.404
SEM28728.1
Hypothetical protein.
  
     0.400
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.