STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM07237.1DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (312 aa)    
Predicted Functional Partners:
SEM07258.1
Threonine synthase.
     
 0.777
selD
Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP.
 
     0.591
SEM39496.1
Glutamate synthase domain-containing protein 1.
  
  
 0.558
SEM14860.1
PAS domain S-box-containing protein.
   
  
 0.428
msrB
Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.426
SEL96326.1
PAS domain S-box-containing protein.
   
  
 0.425
SEL96462.1
PAS domain S-box-containing protein.
   
  
 0.425
SEM66668.1
Signal transduction histidine kinase.
   
  
 0.425
SEM64256.1
Iron (metal) dependent repressor, DtxR family.
  
 
 0.419
SEM01299.1
PAS domain S-box-containing protein.
   
  
 0.404
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
Server load: low (36%) [HD]