STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM07272.1Rubredoxin. (66 aa)    
Predicted Functional Partners:
SEL93057.1
Nitrite/Sulfite reductase ferredoxin-like half domain-containing protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 0.939
SEM41167.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.932
SEM06144.1
Pyruvate ferredoxin oxidoreductase delta subunit.
     
 0.765
SEM41050.1
Pyruvate ferredoxin oxidoreductase delta subunit.
     
 0.765
SEM18621.1
NADH-quinone oxidoreductase subunit F.
    
 0.764
SEM15853.1
Aldehyde dehydrogenase (NAD+).
  
 
 0.676
SEM07293.1
Hypothetical protein.
       0.657
SEM51423.1
Tungsten-dependent benzoyl-CoA reductase-related protein bamH.
  
 
 0.622
SEM41117.1
NADH-quinone oxidoreductase subunit F.
  
 
 0.600
SEM07305.1
RNA-binding protein.
       0.549
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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