STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM04356.1Predicted Fe-Mo cluster-binding protein, NifX family. (134 aa)    
Predicted Functional Partners:
SEM04374.1
MinD superfamily P-loop ATPase, contains an inserted ferredoxin domain.
 
  
 0.699
SEM43673.1
Regulatory protein, luxR family.
  
     0.663
SEM04483.1
NifU-like protein.
  
  
 0.602
SEM45132.1
NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
  
 0.549
SEM04386.1
MinD superfamily P-loop ATPase, contains an inserted ferredoxin domain.
 
  
 0.542
SEM04089.1
Hypothetical protein.
 
     0.515
SEM09826.1
4Fe-4S binding domain-containing protein.
 
  
 0.507
SEM43661.1
EamA-like transporter family protein.
  
     0.463
SEM46017.1
Tetratricopeptide repeat-containing protein.
  
     0.457
SEM11618.1
Hypothetical protein.
  
     0.431
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.