STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM04890.1Hypothetical protein. (469 aa)    
Predicted Functional Partners:
SEM04874.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.773
SEM04905.1
Hypothetical protein.
       0.773
SEM04838.1
Polysaccharide transporter, PST family.
       0.496
SEM04859.1
Polysaccharide pyruvyl transferase family protein WcaK.
       0.496
SEM04924.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.491
SEM04937.1
Polysaccharide pyruvyl transferase.
       0.491
SEM04953.1
Coenzyme F420-reducing hydrogenase, beta subunit.
       0.491
SEM04968.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.491
SEM04983.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
       0.460
SEM05005.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
       0.460
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.