STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM04983.1Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid). (219 aa)    
Predicted Functional Partners:
SEM42771.1
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.981
SEM05037.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
 
 
 0.973
SEM05005.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
 
  
 0.950
SEM54977.1
Glycosyltransferase, GT2 family.
  
 
 0.950
SEM05022.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.892
SEM04968.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 0.883
SEM42795.1
Non-specific protein-tyrosine kinase.
 
 
 0.864
SEM57530.1
Mannose-6-phosphate isomerase, cupin superfamily.
  
 
 0.849
SEM27926.1
exopolysaccharide/PEP-CTERM locus tyrosine autokinase.
 
 
 0.847
SEM04924.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
 0.831
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.