STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM05550.14Fe-4S dicluster domain-containing protein. (60 aa)    
Predicted Functional Partners:
SEM41167.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.874
SEM18621.1
NADH-quinone oxidoreductase subunit F.
    
 0.870
SEM51423.1
Tungsten-dependent benzoyl-CoA reductase-related protein bamH.
    
 0.845
SEM18592.1
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
  
 
 0.833
SEM05530.1
NADH:flavin oxidoreductase / NADH oxidase family protein.
 
  
  0.829
SEM09826.1
4Fe-4S binding domain-containing protein.
  
 
  0.798
SEM22449.1
Formate dehydrogenase major subunit.
    
 0.797
SEM05510.1
NADH:flavin oxidoreductase / NADH oxidase family protein.
    
  0.796
SEM05574.1
Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family.
       0.762
SEM05588.1
Hypothetical protein.
       0.513
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.