STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM11421.1Mycobactin salicyl-AMP ligase. (549 aa)    
Predicted Functional Partners:
SEM79827.1
Nicotinamidase-related amidase.
  
 0.996
menF
Isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate.
  
 
 0.970
SEL96598.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
 
 
0.948
SEM38667.1
Chorismate mutase / prephenate dehydratase.
  
 
 0.921
trpE
Anthranilate synthase, component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concent [...]
 
 
 0.870
SEM67335.1
Enterochelin esterase.
  
  
 0.866
SEM57168.1
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
  
  
  0.791
SEM19648.1
MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG.
  
  
 0.778
SEM05474.1
Predicted hydrolase of the alpha/beta superfamily.
  
    0.776
SEM11790.1
3-oxoacyl-[acyl-carrier-protein] reductase.
  
 0.582
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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