STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM09406.1Hypothetical protein. (572 aa)    
Predicted Functional Partners:
SEM09382.1
Type VI secretion system lysozyme-like protein.
       0.731
SEM09424.1
Hypothetical protein.
       0.715
SEM09456.1
Type IV / VI secretion system protein, DotU family.
       0.673
SEM09439.1
Type VI secretion system protein ImpG.
       0.662
SEM09362.1
Type VI secretion system protein ImpJ.
       0.579
SEM09481.1
Hypothetical protein.
       0.538
SEM09500.1
Type VI secretion, VasB, ImpH, VC_A0111.
       0.449
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.