STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM16416.1Hypothetical protein. (395 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
    0.815
SEM16437.1
Predicted oxidoreductase.
  
 
 0.729
SEM16456.1
Flavodoxin.
 
     0.635
SEM16404.1
AraC-type DNA-binding protein.
       0.519
SEM16378.1
Hypothetical protein.
       0.507
SEM16511.1
Predicted oxidoreductase.
  
 
 0.501
SEM13635.1
Alcohol dehydrogenase.
  
  
0.480
SEM41167.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
  
 0.459
SEM15853.1
Aldehyde dehydrogenase (NAD+).
 
 
 0.446
SEM44645.1
Hypothetical protein.
   
    0.439
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.