STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM13948.1Histidine ammonia-lyase. (516 aa)    
Predicted Functional Partners:
SEM71909.1
TolB protein.
  
  
 0.964
SEM38667.1
Chorismate mutase / prephenate dehydratase.
   
 
 0.890
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
    
 0.863
SEM73773.1
Glutamate formiminotransferase.
 
    0.717
hisB
Imidazoleglycerol-phosphate dehydratase.
    
 0.616
SEL96598.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
  
 
 0.605
SEM44796.1
Acyl carrier protein.
 
  
  0.591
SEM05510.1
NADH:flavin oxidoreductase / NADH oxidase family protein.
   
 
 0.587
SEM05530.1
NADH:flavin oxidoreductase / NADH oxidase family protein.
   
 
 0.587
SEM01705.1
NAD(P)H-dependent FMN reductase.
  
  
  0.566
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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