STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM14517.1Fe-S oxidoreductase. (536 aa)    
Predicted Functional Partners:
SEM41167.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.924
SEM14285.1
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
 0.821
SEM39496.1
Glutamate synthase domain-containing protein 1.
    
 0.810
SEM14539.1
Hypothetical protein.
       0.773
SEM64918.1
Coenzyme F420-reducing hydrogenase, delta subunit.
 
  
 0.773
SEM45399.1
[NiFe]-hydrogenase I apoprotein, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 0.584
SEM51384.1
Coenzyme F420-reducing hydrogenase, delta subunit.
 
 
 0.582
SEM09826.1
4Fe-4S binding domain-containing protein.
  
 
 0.540
SEL96598.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
 
  
 0.437
SEM18527.1
NAD(P)-dependent nickel-iron dehydrogenase catalytic subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
  
 0.430
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.