STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepALeucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. (505 aa)    
Predicted Functional Partners:
SEM37139.1
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.817
SEM32111.1
Aspartate aminotransferase.
   
  0.811
SEM61053.1
L-aspartate aminotransferase apoenzyme.
   
  0.811
SEM54541.1
Protein of unknown function.
  
 0.735
SEM75773.1
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.730
SEM31164.1
Cystathione beta-lyase.
  
 
  0.704
cysS-2
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.695
SEM19691.1
Small GTP-binding protein domain-containing protein.
    
  0.646
SEM05269.1
Methionine synthase (B12-dependent).
 
   
 0.633
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
  0.617
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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