STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM17953.1HD-like signal output (HDOD) domain, no enzymatic activity. (287 aa)    
Predicted Functional Partners:
SEM17964.1
PAS domain S-box-containing protein.
    
  0.815
SEM41375.1
Chemotaxis protein CheX, a CheY P-specific phosphatase.
 
     0.560
SEM24218.1
PAS domain S-box-containing protein.
   
  0.521
SEL96326.1
PAS domain S-box-containing protein.
   
  0.516
SEL96462.1
PAS domain S-box-containing protein.
   
  0.516
SEM66668.1
Signal transduction histidine kinase.
   
  0.516
SEM26521.1
Chemotaxis protein CheX.
 
     0.501
SEM35300.1
Flagellar motor switch protein FliM.
 
    0.485
flgI
Flagellar P-ring protein precursor FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
     0.476
flgH
Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
     0.462
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.