STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM18854.1Iron only hydrogenase large subunit, C-terminal domain. (454 aa)    
Predicted Functional Partners:
SEM18621.1
NADH-quinone oxidoreductase subunit F.
 
 
 0.993
SEM51423.1
Tungsten-dependent benzoyl-CoA reductase-related protein bamH.
 
 
 0.993
SEM18835.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
     0.947
SEM18817.1
DRTGG domain-containing protein.
 
     0.934
SEM18882.1
Hypothetical protein.
 
     0.905
SEM41117.1
NADH-quinone oxidoreductase subunit F.
 
 
 0.895
SEM18639.1
NADP-reducing hydrogenase subunit HndB.
 
 
 0.877
SEM09826.1
4Fe-4S binding domain-containing protein.
   
 0.868
SEM18742.1
Hypothetical protein.
 
 0.828
SEM18699.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
     0.777
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.