STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM19525.1Predicted metal-dependent enzyme of the double-stranded beta helix superfamily. (248 aa)    
Predicted Functional Partners:
SEM19545.1
Epoxyqueuosine reductase QueG (queuosine biosynthesis).
 
     0.749
SEM19505.1
NADPH-dependent FMN reductase.
       0.718
SEM19564.1
Addiction module toxin, RelE/StbE family.
       0.664
SEM19589.1
Hypothetical protein.
       0.664
SEM06923.1
Tetratricopeptide repeat-containing protein.
  
     0.637
SEM41537.1
Bacterioferritin.
  
     0.619
SEM70929.1
PD-(D/E)XK nuclease superfamily protein.
  
     0.613
SEM70908.1
ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily.
  
     0.549
SEM65201.1
Hypothetical protein.
  
     0.520
SEM59921.1
Radical SAM additional 4Fe4S-binding SPASM domain-containing protein.
  
     0.490
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.