STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM19564.1Addiction module toxin, RelE/StbE family. (95 aa)    
Predicted Functional Partners:
SEL94289.1
DNA-damage-inducible protein J.
  
 
 0.902
SEM19589.1
Hypothetical protein.
     
 0.812
SEM19545.1
Epoxyqueuosine reductase QueG (queuosine biosynthesis).
       0.773
SEM19525.1
Predicted metal-dependent enzyme of the double-stranded beta helix superfamily.
       0.664
SEM19505.1
NADPH-dependent FMN reductase.
       0.619
SEM19603.1
Hypothetical protein.
       0.492
SEM68567.1
Hypothetical protein.
  
     0.470
SEM50986.1
mRNA interferase RelE/StbE.
 
   
 0.443
SEM49287.1
Hypothetical protein.
  
     0.412
SEM68528.1
FtsX-like permease family protein.
  
     0.404
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.