STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM22273.1Hypothetical protein. (279 aa)    
Predicted Functional Partners:
SEM22282.1
Hypothetical protein.
       0.480
SEM39653.1
Amidohydrolase.
  
     0.458
SEM23572.1
Hypothetical protein.
  
     0.439
SEM51159.1
Hypothetical protein.
  
     0.438
SEM20140.1
Hypothetical protein.
  
     0.433
SEL96578.1
Alcohol dehydrogenase.
 
 
  0.426
SEM02355.1
Aminocarboxymuconate-semialdehyde decarboxylase.
  
  
  0.420
SEM15853.1
Aldehyde dehydrogenase (NAD+).
 
 
 0.417
SEM11338.1
Aminocarboxymuconate-semialdehyde decarboxylase.
  
  
  0.412
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.