STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM22363.1Peptide/nickel transport system substrate-binding protein. (548 aa)    
Predicted Functional Partners:
SEM34626.1
Peptide/nickel transport system permease protein.
 0.997
SEM34638.1
Peptide/nickel transport system permease protein.
 0.996
SEM14936.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.981
SEM41167.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
    0.975
SEM14915.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.970
SEM29152.1
Methyl-accepting chemotaxis protein.
     
 0.796
SEM22379.1
PAS domain S-box-containing protein.
       0.603
SEM22334.1
Methyl-accepting chemotaxis protein.
    
 0.581
SEM70395.1
Uroporphyrinogen III methyltransferase / synthase.
     
 0.562
SEM35600.1
Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
   
   0.508
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.