STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM22899.1Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (413 aa)    
Predicted Functional Partners:
SEM22886.1
Multidrug efflux pump.
 0.976
SEM22867.1
Outer membrane protein, multidrug efflux system.
 
 0.967
SEM10174.1
Hydrophobic/amphiphilic exporter-1, HAE1 family.
 0.909
SEM13874.1
Hydrophobic/amphiphilic exporter-1, HAE1 family.
 0.908
SEM10155.1
Outer membrane protein, multidrug efflux system.
 
 0.880
SEM09937.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
 
 0.878
SEM13860.1
Outer membrane protein, multidrug efflux system.
 
 0.875
SEM03951.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
 
 0.855
SEM06502.1
Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.841
SEM25846.1
Outer membrane protein TolC; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.
 
 0.641
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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