STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM22142.1Acetoin utilization deacetylase AcuC. (248 aa)    
Predicted Functional Partners:
SEM05805.1
ATPase family associated with various cellular activities (AAA).
   
 0.830
htpG
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity.
   
 0.824
SEM18405.1
WD domain-containing protein, G-beta repeat-containing protein.
   
 0.821
SEL92944.1
SWIM zinc finger.
    
 0.652
SEM10118.1
Superfamily II DNA or RNA helicase, SNF2 family.
    
 0.652
SEM39853.1
Helicase conserved C-terminal domain-containing protein.
    
 0.652
SEM26819.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.590
SEM29701.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.590
SEM15338.1
Ankyrin repeat.
   
 0.572
SEM49204.1
Ca2+-binding protein, EF-hand superfamily.
    
 0.568
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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