STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM25814.1Putative ABC transport system ATP-binding protein. (230 aa)    
Predicted Functional Partners:
SEM25793.1
Putative ABC transport system permease protein.
 0.997
SEM03906.1
Putative ABC transport system permease protein.
 0.989
SEM25828.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.965
SEM03935.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.852
SEM65785.1
ABC-type transport system, involved in lipoprotein release, permease component.
 
 0.736
SEM62896.1
Putative ABC transport system permease protein.
 
 0.679
SEM40703.1
Putative ABC transport system permease protein.
 
 0.663
SEM25846.1
Outer membrane protein TolC; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.
   
 
 0.647
SEM68528.1
FtsX-like permease family protein.
  
 0.647
SEM18072.1
Lipoprotein-releasing system permease protein.
  
 0.618
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.