STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM29462.1Glycosyltransferase involved in cell wall bisynthesis. (410 aa)    
Predicted Functional Partners:
SEM17913.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
  0.715
SEM35051.1
Alpha-amylase.
  
 
 0.704
SEM41900.1
Alpha-amylase.
  
 
 0.704
SEM29444.1
Tfp pilus assembly protein PilF.
  
    0.664
SEM70039.1
1,4-alpha-glucan branching enzyme.
   
 0.628
SEM72635.1
Alpha-amylase.
   
 0.628
SEM42633.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.612
SEM42771.1
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.599
SEL96598.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
 
 
 0.506
SEM53132.1
Dolichol-phosphate mannosyltransferase.
 
 
  0.504
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.