STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM29659.1Protein of unknown function DUF115. (274 aa)    
Predicted Functional Partners:
SEM29710.1
CMP-N-acetylneuraminic acid synthetase.
 
    0.952
SEM29675.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
    0.911
SEM29701.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
     0.909
SEM29763.1
Glycosyl transferase family 2.
 
     0.896
SEL94797.1
Glycosyl transferases group 1.
  
  
 0.835
SEM29640.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.809
SEM29617.1
Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family.
       0.773
SEM29596.1
Glycosyltransferase, GT2 family.
       0.757
SEM29739.1
Kynurenine formamidase.
 
     0.731
SEM18506.1
Hydrogenase maturation protease.
  
     0.674
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.