STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM28371.1UDPglucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (458 aa)    
Predicted Functional Partners:
SEM28388.1
UDP-glucuronate decarboxylase.
 0.994
SEM54915.1
Nucleoside-diphosphate-sugar epimerase.
 0.958
SEM54950.1
dTDP-glucose 4,6-dehydratase.
 
 0.949
SEM42771.1
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.943
SEL98620.1
UDP-glucuronate 4-epimerase.
 
 0.922
SEL98639.1
UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.905
SEL98560.1
Na+-driven multidrug efflux pump.
  
  
 0.871
SEM04838.1
Polysaccharide transporter, PST family.
  
  
 0.871
SEM57530.1
Mannose-6-phosphate isomerase, cupin superfamily.
  
 
 0.837
SEM54977.1
Glycosyltransferase, GT2 family.
  
  
 0.769
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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