STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM31088.1Hypothetical protein; Belongs to the UPF0250 family. (92 aa)    
Predicted Functional Partners:
SEM31053.1
Hypothetical protein.
       0.788
SEM31068.1
Hypothetical protein.
       0.788
SEM43222.1
Alpha/beta hydrolase family protein.
  
     0.732
SEM52005.1
General secretion pathway protein M.
  
     0.648
SEM31103.1
Acetolactate synthase-1/2/3 large subunit.
       0.609
SEM70908.1
ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily.
  
     0.605
SEM51954.1
General secretion pathway protein J.
  
     0.604
SEM20187.1
Conserved hypothetical protein, cofD-related.
  
     0.602
SEM51921.1
General secretion pathway protein H.
  
     0.589
SEM70929.1
PD-(D/E)XK nuclease superfamily protein.
  
     0.586
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.