STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM31726.1Predicted Zn-dependent peptidase. (476 aa)    
Predicted Functional Partners:
SEM31750.1
Predicted Zn-dependent peptidase; Belongs to the peptidase M16 family.
  
0.993
SEL96598.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
  
 0.947
nuoD
NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
   
 
 0.937
SEM18621.1
NADH-quinone oxidoreductase subunit F.
  
 
 0.917
SEM41117.1
NADH-quinone oxidoreductase subunit F.
   
 
 0.917
SEM41132.1
4Fe-4S dicluster domain-containing protein.
   
 
 0.917
SEM51423.1
Tungsten-dependent benzoyl-CoA reductase-related protein bamH.
   
 
 0.917
SEM51438.1
4Fe-4S dicluster domain-containing protein.
   
 
 0.917
nuoC
NADH dehydrogenase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.
   
 
 0.916
SEM41167.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.913
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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