STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM31940.1Chemotaxis protein CheX, a CheY P-specific phosphatase. (205 aa)    
Predicted Functional Partners:
SEM29169.1
CheA signal transduction histidine kinase.
  
 0.994
SEM35300.1
Flagellar motor switch protein FliM.
 
 0.994
SEM35325.1
Flagellar motor switch protein FliN/FliY.
  
 0.988
SEM07052.1
Flagellar motor switch protein FliG.
  
 0.986
SEM36916.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 
 0.981
cheD
Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
  
 0.979
cheD-2
Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
  
 0.979
SEM01448.1
Chemotaxis signal transduction protein.
 
 
 0.977
flgK
Flagellar hook-associated protein 1 FlgK.
  
 
 0.922
SEM63494.1
PAS domain-containing protein.
  
 
 0.900
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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