STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM32518.1Putative negative regulator of RcsB-dependent stress response. (224 aa)    
Predicted Functional Partners:
hisS
histidyl-tRNA synthetase.
  
    0.809
SEM51800.1
Hypothetical protein.
  
    0.802
SEM32462.1
Homoserine dehydrogenase.
       0.789
ftsL
Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family.
  
 
   0.785
SEM32482.1
Phosphoglycerate mutase.
       0.781
SEM32499.1
acyl-CoA thioester hydrolase.
       0.781
SEM53836.1
Protein of unknown function.
  
     0.770
SEM23742.1
LysM domain-containing protein.
  
     0.753
SEM47898.1
Cell division protein DedD (protein involved in septation).
 
     0.750
SEM37993.1
TolB amino-terminal domain-containing protein.
  
     0.740
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.