STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM36916.1Two-component system, chemotaxis family, CheB/CheR fusion protein. (1025 aa)    
Predicted Functional Partners:
SEL96462.1
PAS domain S-box-containing protein.
 0.999
SEM26555.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.999
SEM29169.1
CheA signal transduction histidine kinase.
 
 0.999
SEM66668.1
Signal transduction histidine kinase.
 0.999
SEL96326.1
PAS domain S-box-containing protein.
 0.998
SEM01448.1
Chemotaxis signal transduction protein.
  
 0.998
SEM01949.1
PAS domain S-box-containing protein.
 
 0.998
SEM01299.1
PAS domain S-box-containing protein.
 
 0.997
SEM26721.1
Purine-binding chemotaxis protein CheW.
 
 0.997
SEM29133.1
CheW protein.
 
 0.997
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.