STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM37183.1L,D-transpeptidase ErfK/SrfK. (442 aa)    
Predicted Functional Partners:
SEM37196.1
L,D-transpeptidase catalytic domain.
 
  
 0.905
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
   
 
 0.897
SEM47581.1
Conserved hypothetical protein.
   
 
 0.870
SEM55756.1
N-acetylmuramoyl-L-alanine amidase.
  
 0.826
SEM35051.1
Alpha-amylase.
    
  0.761
SEM41900.1
Alpha-amylase.
    
  0.761
SEM29041.1
Cell division protein FtsQ; Essential cell division protein.
   
 
 0.749
SEL94539.1
Penicillin-binding protein, 1A family.
   
 
 0.736
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
   
 
 0.736
SEM61136.1
N-acetylmuramoyl-L-alanine amidase.
  
 0.727
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.