STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM40999.1Fumarate hydratase subunit alpha. (288 aa)    
Predicted Functional Partners:
SEM41020.1
Fumarate hydratase subunit beta.
 
 0.999
SEL98903.1
Malate dehydrogenase (oxaloacetate-decarboxylating).
 
 
 0.917
argH
Argininosuccinate lyase.
    
  0.842
SEM18621.1
NADH-quinone oxidoreductase subunit F.
  
 
 0.838
SEM22449.1
Formate dehydrogenase major subunit.
     
 0.782
SEM14285.1
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
 0.771
recR
DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
       0.759
SEM23857.1
Isocitrate dehydrogenase (NADP); Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
  
 0.757
SEM40079.1
Glycine dehydrogenase (decarboxylating) beta subunit.
   
    0.754
SEM14797.1
succinyl-CoA synthetase (ADP-forming) beta subunit.
  
 
 0.749
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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