STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM41770.1Putative NADPH-quinone reductase (modulator of drug activity B). (200 aa)    
Predicted Functional Partners:
SEM55235.1
Kef-type potassium/proton antiporter, CPA2 family; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
 
 0.940
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
    
  0.811
SEM41753.1
Methyltransferase domain-containing protein.
 
  
  0.778
SEL98961.1
NAD(P)H dehydrogenase (quinone).
     
 0.769
SEM41784.1
Putative acetyltransferase.
  
    0.711
SEM41738.1
Hypothetical protein; Belongs to the UPF0178 family.
       0.598
SEM11506.1
Endoribonuclease L-PSP.
 
  
  0.476
zupT
Zinc transporter, ZIP family; Mediates zinc uptake. May also transport other divalent cations; Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily.
       0.473
SEM05134.1
Aspartate/methionine/tyrosine aminotransferase.
   
    0.469
SEM32111.1
Aspartate aminotransferase.
   
    0.469
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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