STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM42795.1Non-specific protein-tyrosine kinase. (274 aa)    
Predicted Functional Partners:
SEM42821.1
Polysaccharide chain length determinant protein, PEP-CTERM locus subfamily.
 
 
 0.919
SEM42790.1
General secretion pathway protein A.
 
     0.914
SEM42855.1
Polysaccharide export outer membrane protein.
 
 0.909
SEM27898.1
Polysaccharide export outer membrane protein.
 
 0.869
SEM04983.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
 
 0.864
SEM27916.1
Polysaccharide chain length determinant protein, PEP-CTERM locus subfamily.
 
 
 0.822
SEM41167.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.773
SEM04838.1
Polysaccharide transporter, PST family.
 
  
 0.721
SEM27850.1
Exosortase D, VPLPA-CTERM-specific.
 
    0.719
SEM05037.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
 
 
 0.717
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.