STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM42638.1Hexapeptide repeat of succinyl-transferase. (223 aa)    
Predicted Functional Partners:
SEM05005.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
 
     0.738
SEM42610.1
Transferase hexapeptide (six repeat-containing protein).
 
    
0.729
SEM42633.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.641
SEM04983.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
  
 0.517
SEM42663.1
Hypothetical protein.
       0.467
SEM42677.1
Hypothetical protein.
       0.467
SEL98602.1
UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
 
 0.466
SEM42593.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.453
SEM04826.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.437
SEM05022.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.437
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.