STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM44712.1SnoaL-like domain-containing protein. (194 aa)    
Predicted Functional Partners:
SEM44724.1
Predicted NAD/FAD-binding protein.
 
   
 0.902
SEM44750.1
Cyclopropane-fatty-acyl-phospholipid synthase.
 
   
 0.848
SEM20708.1
Phenazine biosynthesis protein PhzF family.
  
 
 0.546
SEM74277.1
Pyridoxamine 5'-phosphate oxidase.
  
 
 0.536
SEM37554.1
Transglutaminase-like cysteine proteinase BTLCP.
  
     0.484
SEM44671.1
Uncharacterized conserved protein (COG2071).
       0.474
SEM44689.1
Hypothetical protein.
       0.474
SEM44645.1
Hypothetical protein.
       0.427
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.