STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM44750.1Cyclopropane-fatty-acyl-phospholipid synthase. (665 aa)    
Predicted Functional Partners:
SEM44724.1
Predicted NAD/FAD-binding protein.
  
 0.997
SEM44712.1
SnoaL-like domain-containing protein.
 
   
 0.848
SEM69361.1
Predicted integral membrane protein.
  
  
 0.590
SEM76937.1
Uncharacterized membrane protein.
 
     0.493
SEM44767.1
L-2-amino-thiazoline-4-carboxylic acid hydrolase.
       0.482
SEM44645.1
Hypothetical protein.
       0.460
SEM54977.1
Glycosyltransferase, GT2 family.
  
 
 0.460
gcvPA
Glycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.
    
  0.453
SEM40079.1
Glycine dehydrogenase (decarboxylating) beta subunit.
    
  0.453
SEM70373.1
Uncharacterized conserved protein YbgA, DUF1722 family.
     
 0.440
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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