STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM45150.1Cysteine desulfurase; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. (394 aa)    
Predicted Functional Partners:
SEM04483.1
NifU-like protein.
 
 0.999
SEM45132.1
NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
 
 0.999
SEM04456.1
NifU homolog involved in Fe-S cluster formation.
 
 0.977
SEM39428.1
NifU homolog involved in Fe-S cluster formation.
  
 0.942
SEM63308.1
NifU-like N terminal domain-containing protein.
  
 0.942
SEM49832.1
Selenium metabolism protein YedF; Belongs to the sulfur carrier protein TusA family.
   
 0.922
SEM36996.1
Rrf2 family protein.
  
 
 0.911
SEM19945.1
Molybdopterin or thiamine biosynthesis adenylyltransferase.
   
 0.867
SEM75755.1
Hydroxyacylglutathione hydrolase.
   
 0.850
SEM43388.1
Thiosulfate sulfurtransferase.
   
 0.820
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.