STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM45600.1Stage V sporulation protein R. (551 aa)    
Predicted Functional Partners:
SEM45576.1
Hypothetical protein; Belongs to the UPF0229 family.
 
  
 0.997
SEM45616.1
Predicted Ser/Thr protein kinase.
 
  
 0.992
SEM45561.1
Putative serine protein kinase, PrkA.
 
  
 0.988
SEM04284.1
Hypothetical protein.
  
     0.529
SEM25444.1
PhoH-like ATPase.
  
    0.527
SEM04008.1
TIGR03790 family protein.
  
     0.457
SEM41167.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
  
 0.447
SEL94859.1
Alg9-like mannosyltransferase family protein.
  
  
  0.414
SEM45928.1
Uncharacterized conserved protein YybS, DUF2232 family.
  
     0.402
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.