STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM47639.1Glutamate mutase subunit E. (490 aa)    
Predicted Functional Partners:
SEM47606.1
Glutamate mutase subunit S.
 
  0.997
SEM47581.1
Conserved hypothetical protein.
 
     0.885
SEM68682.1
DNA repair ATPase RecN.
  
     0.579
SEM61627.1
[Acyl-carrier-protein] S-malonyltransferase.
    
  0.435
SEM47657.1
cob(I)yrinic acid a,c-diamide adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.
     
 0.420
SEM23132.1
Betaine reductase.
  
  
  0.418
SEM39520.1
4Fe-4S binding domain-containing protein; Belongs to the glutamate synthase family.
    
  0.417
SEM39534.1
Glutamate synthase conserved region-containing protein.
    
  0.417
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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